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Proposal: 3D plots #11

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alexlenail opened this issue Sep 18, 2018 · 1 comment
Open

Proposal: 3D plots #11

alexlenail opened this issue Sep 18, 2018 · 1 comment
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@alexlenail
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alexlenail commented Sep 18, 2018

Perhaps the plotting tool I have always wanted most is a robust, manipulable, 3D plotting tool, like CAD for data.

  • It should provide the ability to embed points, curves (and lines), surfaces (and planes), and arrows (think vectorfield) together in 2D or 3D.
  • It should do a really good job of projecting high dimensional objects (points, lines, surfaces) into lower dimensional spaces (PCA, t-SNE, arbitrarily defined subspaces).
  • It should beautifully animations between these different subspaces / views.
  • It should provide a nice UI to color objects by different attributes / values on the objects.

What prior art can we find which already solves some or all of this problem? @jonathanzong

@alexlenail
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I'm finding that the plotly plot editing UI is really nice -- the only limitation I can find is it doesn't seem obvious how to add multiple types of objects (e.g. surfaces and points) in the same figure

screen shot 2018-09-22 at 2 16 08 pm

https://plot.ly/create/?fid=chelsea_lyn:11131

This leads me to believe perhaps the more general problem has been well solved by plotly / others, and perhaps it's better to focus on the narrow problem for computational biology.

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