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goliveir@scripps.edu committed Oct 15, 2019
1 parent 109b922 commit 978f3ce
Showing 1 changed file with 12 additions and 12 deletions.
24 changes: 12 additions & 12 deletions README.md
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Expand Up @@ -11,41 +11,41 @@ To assess the functional evolution of ZIKV, we have generated a library of infec

|Clade |ZIKV Genome Locus|Gene|AA location|Ancestor AA|Mutant AA|Comments |
|:--- |:--- |:---|:--- |:--- |:--- |:-- |
|AM-A |3534 |NS1 |349 |M |V | |
|AM-A |3534 |NS1 |349 |M |V | Revert V-->M |
|AM-B (Paraiba_01) No Changes | |
|AM-C |8631 |NS5 |322 |I |V | |
| |10301 |NS5 |878 |D |E | |
|AM-D |8631 |NS5 |322 |I |V | |
| |10090 |NS5 |808 |T |I | |
| |10301 |NS5 |878 |D |E | |
|AM-E |3534 |NS1 |349 |M |V | |
|AM-E |3534 |NS1 |349 |M |V | Revert V-->M |
| |2788 |NS1 |100 |G |A | |
| |6327 |NS3 |572 |M |L | |
| |9240 |NS5 |525 |R |C | |
|AM-F |3534 |NS1 |349 |M |V | |
| |428 |C |107 |D |E | |
|AM-G |3534 |NS1 |349 |M |V | |
|AM-G |3534 |NS1 |349 |M |V | Revert V-->M |
| |428 |C |107 |D |E | |
| |3459 |NS1 |324 |R |W | |
| |10164 |NS5 |833 |T |A | |
|AM-H |345 |C |80 |I |T | |
| |3534 |NS1 |349 |M |V | |
| |3534 |NS1 |349 |M |V | Revert V-->M |
|AM-I |345 |C |80 |I |T | |
| |3534 |NS1 |349 |M |V | |
| |3534 |NS1 |349 |M |V | Revert V-->M |
| |8467 |NS5 |267 |V |A | |
|AM-J |3534 |NS1 |349 |M |V | |
| |2788 |NS1 |100 |G |A | |
| |6327 |NS3 |572 |M |L | |
| |4731 |NS3 |40 |V |I | |
| |9240 |NS5 |525 |R |C | |
|Pre-AM-1|3534 |NS1 |349 |M |V | |
| |8007 |NS5 |114 |M |V | |
|Pre-AM-2|3534 |NS1 |349 |M |V | |
| |523 |prM |17 |S |N | |
|Pre-AM-1|3534 |NS1 |349 |M |V | Revert V-->M |
| |8007 |NS5 |114 |M |V | Revert V-->M |
|Pre-AM-2|3534 |NS1 |349 |M |V | Revert V-->M |
| |523 |prM |17 |S |N | Revert S-->N |
| |6363 |NS3 |584 |Y |H | |
| |8007 |NS5 |114 |M |V | |
|Pre-AM-3|3534 |NS1 |349 |M |V | |
| |8007 |NS5 |114 |M |V | |
| |8007 |NS5 |114 |M |V | Revert V-->M |
|Pre-AM-3|3534 |NS1 |349 |M |V | Revert V-->M |
| |8007 |NS5 |114 |M |V | Revert V-->M |
| |523 |prM |17 |S |N | |
| |6363 |NS3 |584 |Y |H | |
| |3070 |NS1 |194 |V |A | |
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