Can't install antspy because the antscore is empty

[MurielCuiCui]

Describe the bug
Error on install ants on linux 16.04

To Reproduce
I try to install ants from source , I run the command python setup.py develop under the directory,but it callback :

  CMake Error at pybind11/tools/pybind11Tools.cmake:132 (add_library):
  Cannot find source file:
   antscore/antsApplyTransformsToPoints.cxx

I find the directory ANTsPy/ants/lib/antscore is empty , how can I fixed it ? or find the all files I need?

Expected behavior
I hope to install antspy easily ,thank you
Screenshots
If applicable, add screenshots to help explain your problem.

[stnava]

Try python3

On Sat, Apr 20, 2019 at 9:11 AM Cuiting WANG ***@***.***> wrote: *Describe the bug* Error on install ants on linux 16.04 *To Reproduce* I try to install ants from source , I run the command *python setup.py develop* under the directory,but it callback : CMake Error at pybind11/tools/pybind11Tools.cmake:132 (add_library): Cannot find source file: antscore/antsApplyTransformsToPoints.cxx I find the directory ANTsPy/ants/lib/antscore is empty , how can I fixed it ? or find the all files I need? *Expected behavior* I hope to install antspy easily ,thank you *Screenshots* If applicable, add screenshots to help explain your problem. [image: image] <https://user-images.githubusercontent.com/37406633/56457659-ada24e80-63b0-11e9-8a7e-9d0fd3178b17.png> [image: image] <https://user-images.githubusercontent.com/37406633/56457670-c6aaff80-63b0-11e9-9f75-12d3f185f537.png> — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#56>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AACPE7UGBBA5IWNZLH5XAOTPRMI6NANCNFSM4HHJUUHA> .

-- brian

[MurielCuiCui]

It doesn't work,either . but still thank for your help

[stnava]

maybe you want to start fresh. remove everything, clone again and follow the .travis.yml or circleci build steps:

https://github.com/ANTsX/ANTsPy/blob/master/.circleci/config.yml

as you can see on the badges, the linux tests are passing so you are likely missing something on your system or the ANTs clone is failing.

[MurielCuiCui]

I try and it worked ! thank you !!! I follow the tutorial and I find some command doesn't exist ,like :
img.plot(overlay=thickimg, overlay_cmap='jet')
TypeError: plot() got an unexpected keyword argument 'overlay'

[stnava]

See help plot.ants

On Mon, Apr 22, 2019 at 3:56 AM Cuiting WANG ***@***.***> wrote: I try and it worked ! thank you !!! I follow the tutorial and I find some command doesn't exist ,like : img.plot(overlay=thickimg, overlay_cmap='jet') TypeError: plot() got an unexpected keyword argument 'overlay' — You are receiving this because you commented. Reply to this email directly, view it on GitHub <#56 (comment)>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AACPE7W4KVUFNAGOTVL6TG3PRVVSZANCNFSM4HHJUUHA> .

-- brian