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add genotypes (GT field) to final vcf #11

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aryarm opened this issue Apr 13, 2020 · 1 comment
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add genotypes (GT field) to final vcf #11

aryarm opened this issue Apr 13, 2020 · 1 comment
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enhancement New feature or request low-priority

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aryarm commented Apr 13, 2020 •
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so that we can use this for allele specific expression (and make a conclusion about whether our performance differs for het alts vs hom alts)

you could start by using the genotypes output by platinum genomes
@aryarm aryarm changed the title create a script for testing whether varca performance differs for het alts vs hom alts add genotypes (GT field) to final vcf Jun 27, 2020
@aryarm aryarm added the enhancement New feature or request label Jul 13, 2021
@aryarm aryarm mentioned this issue Apr 2, 2022
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aryarm commented Apr 16, 2022

Duplicate of #43

@aryarm aryarm marked this as a duplicate of #43 Apr 16, 2022
@aryarm aryarm closed this as completed Apr 16, 2022
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