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Daria-Maltseva edited this page Jul 3, 2020 · 6 revisions

WAl

==============================================================================
Info on 2-Mode Network 20. C:\Mail.Ru Cloud\ANR HSE\ANR Projects\SNA Vlado Batagelj\Comparison\LietzSN\WAl.net [2-Mode] (71340)
==============================================================================
Number of vertices (n): 71340
----------------------------------------------------------
                                       Arcs          Edges
----------------------------------------------------------
Total number of lines                 68227              0
----------------------------------------------------------
Number of loops                           0              0
Number of multiple lines                 15              0
----------------------------------------------------------

2-Mode Network: Rows=25760, Cols=45580
Density [2-Mode] = 0.00005811
Average Degree = 1.91272778

Transform - Remove - Multiple lines - Single lines

==============================================================================
Info on 2-Mode Network 21. Simplification (Single Line) of N20 (71340)
==============================================================================
Number of vertices (n): 71340
----------------------------------------------------------
                                       Arcs          Edges
----------------------------------------------------------
Total number of lines                 68212              0
----------------------------------------------------------
Number of loops                           0              0
Number of multiple lines                  0              0
----------------------------------------------------------

2-Mode Network: Rows=25760, Cols=45580
Density [2-Mode] = 0.00005810
Average Degree = 1.91230726

Indegree:

==============================================================================
10. Input Degree of N21 (71340)
==============================================================================
Dimension: 71340
The lowest value:                         0.0000
The highest value:                       74.0000

Highest values: 

      Rank    Vertex                       Value   Id
--------------------------------------------------------
         1     47406                     74.0000   LATKIN,_CARL
         2     31051                     49.0000   CARLEY,_KATHLEEN
         3     27836                     48.0000   BARABASI,_ALBERT
         4     54195                     46.0000   NEWMAN,_M_E_J
         5     28664                     44.0000   BERKMAN,_LISA
         6     65780                     39.0000   VALENTE,_THOMAS
         7     48302                     38.0000   LEYDESDORFF,_LOET
         8     45076                     38.0000   KAZIENKO,_PRZEMYSLAW
         9     35808                     38.0000   DUNBAR,_ROBIN_I_M
        10     67924                     37.0000   WELLMAN,_BARRY
        11     29528                     36.0000   BORGATTI,_STEPHEN
        12     32567                     32.0000   CHRISTAKIS,_NICHOLAS
        13     62299                     32.0000   SNIJDERS,_TOM_A_B
        14     45041                     32.0000   KAWACHI,_ICHIRO
        15     30490                     31.0000   BURT,_RONALD_S
        16     55987                     31.0000   PATTISON,_PHILIPPA
        17     42491                     31.0000   HOSSAIN,_LIAQUAT
        18     35500                     31.0000   DOREIAN,_PATRICK
        19     49151                     30.0000   LITWIN,_HOWARD
        20     58796                     29.0000   ROBINS,_GARRY
        21     47408                     29.0000   LATORA,_VITO
        22     44477                     29.0000   JUNG,_JASON_J
        23     37716                     28.0000   FOWLER,_JAMES
        24     46458                     27.0000   KRACKHARDT,_DAVID
        25     66441                     27.0000   VESPIGNANI,_ALESSANDRO
        26     37934                     26.0000   FRIEDMAN,_SAMUEL_R
        27     36754                     26.0000   FALOUTSOS,_CHRISTOS
        28     67672                     26.0000   WATTS,_DUNCAN
        29     56256                     25.0000   PENTLAND,_ALEX
        30     27995                     25.0000   BARRAT,_ALAIN
--------------------------------------------------------
Sum (all values):                     68212.0000

AA collaboration network

1st collaboration network AAl_1st

(WA)T * WA
Delete loops
Bidirected Arcs to Edges [MIN]

41. AAl_1st (45580)
==============================================================================
Number of vertices (n): 45580
----------------------------------------------------------
                                       Arcs          Edges
----------------------------------------------------------
Number of lines with value=1              0          79792
Number of lines with value#1              0           7802
----------------------------------------------------------
Total number of lines                     0          87594
----------------------------------------------------------
Number of loops                           0              0
Number of multiple lines                  0              0
----------------------------------------------------------

Density1 [loops allowed]    = 0.00008432
Density2 [no loops allowed] = 0.00008433
Average Degree = 3.84352786

Most collaborating pairs

Line values

41. AAl_1st (45580)
==============================================================================
Lowest value of line:               1.00000000
Highest value of line:             20.00000000

         Line Values                                   Frequency       Freq%      CumFreq  CumFreq%
---------------------------------------------------------------------------------------------------
 (                       ...                1.0000]        79792     91.0930        79792   91.0930
 (                1.0000 ...                2.0000]         5696      6.5027        85488   97.5957
 (                2.0000 ...                3.0000]         1292      1.4750        86780   99.0707
 (                3.0000 ...                4.0000]          432      0.4932        87212   99.5639
 (                4.0000 ...                5.0000]          150      0.1712        87362   99.7351
 (                5.0000 ...                6.0000]           82      0.0936        87444   99.8288
 (                6.0000 ...                7.0000]           47      0.0537        87491   99.8824
 (                7.0000 ...                8.0000]           23      0.0263        87514   99.9087
 (                8.0000 ...                9.0000]           17      0.0194        87531   99.9281
 (                9.0000 ...               10.0000]           17      0.0194        87548   99.9475
 (               10.0000 ...               11.0000]           19      0.0217        87567   99.9692
 (               11.0000 ...               12.0000]            7      0.0080        87574   99.9772
 (               12.0000 ...               13.0000]            3      0.0034        87577   99.9806
 (               13.0000 ...               14.0000]            4      0.0046        87581   99.9852
 (               14.0000 ...               15.0000]            5      0.0057        87586   99.9909
 (               15.0000 ...               16.0000]            3      0.0034        87589   99.9943
 (               16.0000 ...               17.0000]            1      0.0011        87590   99.9954
 (               17.0000 ...               18.0000]            1      0.0011        87591   99.9966
 (               18.0000 ...               19.0000]            1      0.0011        87592   99.9977
 (               19.0000 ...               20.0000]            2      0.0023        87594  100.0000
---------------------------------------------------------------------------------------------------
  Total                                                    87594    100.0000

Trashold 10 = 82 nodes. Saved network AA_1st_LineCut.net
AA 1st Line cut picture

2nd collaboration network AAl_2nd

Select networks:

WAl.net - Transpose WAl.net - Normalize with norm2.mcr (25,760) Multiply Networks -> AAl_2nd.net

==============================================================================
47. AAl_2nd (45580)
==============================================================================
Number of vertices (n): 45580
----------------------------------------------------------
                                       Arcs          Edges
----------------------------------------------------------
Number of lines with value=1           5153              0
Number of lines with value#1         215615              0
----------------------------------------------------------
Total number of lines                220768              0
----------------------------------------------------------
Number of loops                       45580              0
Number of multiple lines                  0              0
----------------------------------------------------------

Density [loops allowed] = 0.00010626
Average Degree = 9.68705573

Collaborativeness index

Get loops = total contribution (in sense of fractional approach) AAl_2nd_loops_TotContr.vec Loops +30

23. AAl_2nd_loops_TotContr (45580)
==============================================================================
Dimension: 45580
The lowest value:                         0.0119
The highest value:                       29.2333

Highest values: 

      Rank    Vertex                       Value   Id
--------------------------------------------------------
         1     28435                     29.2333   NEWMAN,_M_E_J
         2      4730                     26.0076   BURT,_RONALD_S
         3     22542                     25.9167   LEYDESDORFF,_LOET
         4     23391                     23.0000   LITWIN,_HOWARD
         5     18717                     22.5833   JUNG,_JASON_J
         6      5291                     21.1996   CARLEY,_KATHLEEN
         7     12154                     21.0000   FRIEDKIN,_NOAH
         8     42164                     19.8667   WELLMAN,_BARRY
         9     10048                     19.7167   DUNBAR,_ROBIN_I_M
        10     21646                     19.6024   LATKIN,_CARL
        11      9740                     19.2500   DOREIAN,_PATRICK
        12      3768                     16.3190   BORGATTI,_STEPHEN
        13      2076                     16.2409   BARABASI,_ALBERT
        14      2904                     15.2882   BERKMAN,_LISA
        15     40020                     15.1017   VALENTE,_THOMAS
        16     20698                     14.7833   KRACKHARDT,_DAVID
        17     36539                     14.3833   SNIJDERS,_TOM_A_B
        18     25310                     14.1667   MARSDEN,_PETER
        19     19316                     13.6667   KAZIENKO,_PRZEMYSLAW
        20     16731                     13.4167   HOSSAIN,_LIAQUAT
        21     20765                     12.8167   KRAUSE,_NEAL
        22     17796                     12.7333   JACKSON,_MATTHEW_O
        23     41912                     12.6667   WATTS,_DUNCAN
        24      6807                     11.6583   CHRISTAKIS,_NICHOLAS
        25     11956                     11.2762   FOWLER,_JAMES
        26     12091                     11.0333   FREEMAN,_L_C
        27     41859                     10.9500   WASSERMAN,_STANLEY
        28     38747                     10.8667   THELWALL,_MIKE
        29     24624                     10.7929   MACY,_MICHAEL
        30      4800                     10.6667   BUTTS,_CARTER
--------------------------------------------------------
Sum (all values):                     25766.3843

self-sufficiency = total (total contribution) / indegree [v] (author`s N of works)

WAl - /Centrality/Degree/Input        
Network/2-Mode Network/Partition into 2 Modes
select the 2-Mode partition
Operations/Vector+Partition/Extract SubVector [2]
File/Vector/Change Label [author's total N of works]
- select the Total contribution vector as First
- select the author's total N of works vector as Second
Vectors/Divide (First/Second)
File/Vector/Change Label [self-sufficiency]

collaborativeness = 1 - self-sufficiency

select the AA_2nd net    
Vector/Create Constant Vector [1] 
select the self-sufficiency vector as Second
Vectors/Subtract (First-Second) (1 - self-suff. = collaborativeness]
File/Vector/Change Label [collaborativeness]

The list of authors with 25+ works:

ID	Author		N of works	Total contribution 	Collaborativenness 
21646	LATKIN._CARL		74	19.60	0.74
5291	CARLEY._KATHLEEN	49	21.20	0.57
2076	BARABASI._ALBERT	48	16.24	0.66
28435	NEWMAN._M_E_J		46	29.23	0.36
2904	BERKMAN._LISA		44	15.29	0.65
40020	VALENTE._THOMAS		39	15.10	0.61
10048	DUNBAR._ROBIN_I_M	38	19.72	0.48
19316	KAZIENKO._PRZEMYSLAW	38	13.67	0.64
22542	LEYDESDORFF._LOET	38	25.92	0.32
42164	WELLMAN._BARRY		38	19.87	0.48
3768	BORGATTI._STEPHEN	36	16.32	0.55
6807	CHRISTAKIS._NICHOLAS	32	11.66	0.64
19281	KAWACHI._ICHIRO		32	8.71	0.73
36539	SNIJDERS._TOM_A_B	32	14.38	0.55
4730	BURT._RONALD_S		31	26.01	0.16
9740	DOREIAN._PATRICK	31	19.25	0.38
16731	HOSSAIN._LIAQUAT	31	13.42	0.57
30227	PATTISON._PHILIPPA	31	10.38	0.67
23391	LITWIN._HOWARD		30	23.00	0.23
18717	JUNG._JASON_J		29	22.58	0.22
21648	LATORA._VITO		29	8.18	0.72
33036	ROBINS._GARRY		29	9.75	0.66
11956	FOWLER._JAMES		28	11.28	0.60
20698	KRACKHARDT._DAVID	27	14.78	0.45
40681	VESPIGNANI._ALESSANDRO	27	8.96	0.67
10994	FALOUTSOS._CHRISTOS	26	6.88	0.74
12174	FRIEDMAN._SAMUEL_R	26	5.11	0.80
41912	WATTS._DUNCAN		26	12.67	0.51
2235	BARRAT._ALAIN		25	6.32	0.75
28843	NOWAK._MARTIN		25	9.32	0.63
30496	PENTLAND._ALEX		25	10.24	0.59

4th collaboration network AAl_4th

Select:

  1. Regularly normalized (norm2.mcr) network WAl -- Transpose 2-mode - as 1st
  2. Newman normalized (macro2p.mcr) network WAl -- as 2nd
    Multiply
50. Multiplying N49 * N48 [1-Mode] (45580)
==============================================================================
Number of vertices (n): 45580
----------------------------------------------------------
                                       Arcs          Edges
----------------------------------------------------------
Number of lines with value=1           4803              0
Number of lines with value#1         215965              0
----------------------------------------------------------
Total number of lines                220768              0
----------------------------------------------------------
Number of loops                       45580              0
Number of multiple lines                  0              0
----------------------------------------------------------

Density [loops allowed] = 0.00010626
Average Degree = 9.68705573

Remove loops
Arcs -> Edges - Bidirectional only - SUM values
AAl_4th.net

52. AAl_4th (45580)
==============================================================================
Number of vertices (n): 45580
----------------------------------------------------------
                                       Arcs          Edges
----------------------------------------------------------
Number of lines with value=1              0           5824
Number of lines with value#1              0          81770
----------------------------------------------------------
Total number of lines                     0          87594
----------------------------------------------------------
Number of loops                           0              0
Number of multiple lines                  0              0
----------------------------------------------------------

Density1 [loops allowed]    = 0.00008432
Density2 [no loops allowed] = 0.00008433
Average Degree = 3.84352786

Islands [5,100] = 2062 islands

37. Canonized [Decreasing frequencies] C36 (45580)
==============================================================================
Dimension: 45580
The lowest value:     0
The highest value: 2062

Frequency distribution of cluster values:

   Cluster      Freq     Freq%   CumFreq  CumFreq% Representative
 ----------------------------------------------------------------
         0     27195   59.6643     27195   59.6643 AADITHYA,_KARTHIK
         1        92    0.2018     27287   59.8662 ACITELLI,_L_K
         2        84    0.1843     27371   60.0505 ALBERT,_REKA
         3        83    0.1821     27454   60.2326 ABRAMS,_DANIEL_M
         4        67    0.1470     27521   60.3796 ANDERSON,_R_M
         5        65    0.1426     27586   60.5222 ANJORIN,_MOJISOLA
         6        61    0.1338     27647   60.6560 ACREDOLO,_C
         7        61    0.1338     27708   60.7898 AO,_DAN
         8        59    0.1294     27767   60.9193 ACHANANUPARP,_PALAKORN
         9        58    0.1272     27825   61.0465 BAU,_ROBERTO
        10        57    0.1251     27882   61.1716 ADHIKARI,_ANAMIKA
        11        56    0.1229     27938   61.2944 ANURAG,_MEENAKSHI
        12        50    0.1097     27988   61.4041 ACKER,_CAROLINE
        13        50    0.1097     28038   61.5138 BOHNERT,_AMY_S_B
        14        48    0.1053     28086   61.6191 BOOTH,_B
        15        48    0.1053     28134   61.7244 BENTLEY,_R
        16        47    0.1031     28181   61.8276 ANDERSSON,_ERIK
        17        47    0.1031     28228   61.9307 ABBASI,_AHMED
        18        46    0.1009     28274   62.0316 AGARWAL,_NITIN_(ARKANSAS_UNIV)
        19        46    0.1009     28320   62.1325 AXHAUSEN,_KAY
        20        45    0.0987     28365   62.2312 ABBASI,_ALIREZA
        21        43    0.0943     28408   62.3256 ASHER,_S_R
        22        43    0.0943     28451   62.4199 ARLITT,_MARTIN
        23        43    0.0943     28494   62.5143 ADERHOLD,_J
        24        42    0.0921     28536   62.6064 BESSELL,_PAUL
        25        40    0.0878     28576   62.6942 BACHRACH,_YORAM
        26        39    0.0856     28615   62.7797 ANWURI,_VICTORIA
        27        38    0.0834     28653   62.8631 ANDERSON,_JOAN_(BRITISH_COLUMBIA_UNIV)
        28        37    0.0812     28690   62.9443 AMPT,_AMANDA
        29        37    0.0812     28727   63.0254 AHMED,_ADEL_(N/A)_(SNA)
        30        37    0.0812     28764   63.1066 AIGNER,_WOLFGANG
        31        35    0.0768     28799   63.1834 AXELROD,_R
        32        35    0.0768     28834   63.2602 BOKHARAEI,_HOSSEIN
        33        34    0.0746     28868   63.3348 BALL,_ROBIN
        34        34    0.0746     28902   63.4094 BENISCH,_MICHAEL
        35        33    0.0724     28935   63.4818 AGUIAR-PULIDO,_VANESSA
        36        32    0.0702     28967   63.5520 ARENDT,_DUSTIN
        37        32    0.0702     28999   63.6222 ADLER,_Z
        38        32    0.0702     29031   63.6924 ANDRADE,_NAZARENO
        39        32    0.0702     29063   63.7626 ABBASSI,_ZEINAB
        40        32    0.0702     29095   63.8328 ADKINS,_BARBARA
        41        32    0.0702     29127   63.9030 ACEMOGLU,_DARON
        42        31    0.0680     29158   63.9710 ATKINSON,_KATIE
        43        31    0.0680     29189   64.0391 BASSELIN,_NATHALIE
        44        31    0.0680     29220   64.1071 AMIN,_A_(BRISTOL_UNIV)_(ECON_SOC)
        45        30    0.0658     29250   64.1729 ALAJMI,_BIB
        46        30    0.0658     29280   64.2387 BOLD,_RICHARD
        47        29    0.0636     29309   64.3023 AINLAY,_S_L
        48        29    0.0636     29338   64.3659 ABROL,_SATYEN
        49        29    0.0636     29367   64.4296 CHEN,_ZHANG_J
        50        29    0.0636     29396   64.4932 ABAD,_M
        51        29    0.0636     29425   64.5568 ADDAM,_OMAR
        52        29    0.0636     29454   64.6204 ALEXANDER,_M_C
        53        29    0.0636     29483   64.6841 ANANTHARAM,_PRAMOD
        54        29    0.0636     29512   64.7477 ABRAHAM,_AJITH_(N/A)
        55        29    0.0636     29541   64.8113 AMIRKHANIAN,_YURI
        56        29    0.0636     29570   64.8749 AGUILERA,_M_B
        57        28    0.0614     29598   64.9364 ANWAR,_MOHD
        58        28    0.0614     29626   64.9978 BENBENISHTY,_R
        59        28    0.0614     29654   65.0592 ASTRAND,_N_E
        60        28    0.0614     29682   65.1207 BRUCE,_IRENE
        61        27    0.0592     29709   65.1799 ABBASS,_HUSSEIN
        62        27    0.0592     29736   65.2391 AVISON,_W_R
        63        27    0.0592     29763   65.2984 ALEGRIA,_MARGARITA
        64        27    0.0592     29790   65.3576 ASHIDA,_SATO
        65        27    0.0592     29817   65.4168 ANDERS,_S_L
        66        26    0.0570     29843   65.4739 BOND,_EDWARD
        67        26    0.0570     29869   65.5309 AGULLO-CALATAYUD,_V
        68        26    0.0570     29895   65.5880 CHALLET,_D
        69        26    0.0570     29921   65.6450 CHOR,_D
        70        26    0.0570     29947   65.7021 BARTHES,_JEAN
        71        26    0.0570     29973   65.7591 ADOMAVICIUS,_G
        72        26    0.0570     29999   65.8161 ADIL,_JALEEL
        73        25    0.0548     30024   65.8710 AGNEESSENS,_FILIP
        74        25    0.0548     30049   65.9258 ADHIKARI,_SRADDHA
        75        25    0.0548     30074   65.9807 BERCHICCI,_L
        76        25    0.0548     30099   66.0355 CARPIANO,_RICHARD
        77        25    0.0548     30124   66.0904 ADAMS,_JIMI_(OHIO_STATE_UNIV)
        78        25    0.0548     30149   66.1452 BERARDI,_LUCIANO_(DEPAUL_UNIV)
        79        25    0.0548     30174   66.2001 ABOU-ZEID,_MAYA
        80        25    0.0548     30199   66.2549 BARKSDALE,_CRYSTAL
        81        25    0.0548     30224   66.3098 ANDREWS,_D_W
        82        25    0.0548     30249   66.3646 ARIS,_ALEKS
        83        24    0.0527     30273   66.4173 BEUKEBOOM,_CAMIEL
        84        24    0.0527     30297   66.4699 DAYAL,_UMESHWAR
        85        24    0.0527     30321   66.5226 ANDERSON,_P_(MICHIGAN_UNIV)_(WEB_SCI)
        86        24    0.0527     30345   66.5753 AKULA,_KARTHIK
        87        24    0.0527     30369   66.6279 ABBOTT-CHAPMAN,_J
        88        24    0.0527     30393   66.6806 ARONSON,_J_A
        89        24    0.0527     30417   66.7332 BOXHILL,_LOUISE
        90        23    0.0505     30440   66.7837 ALBERTS,_SUSAN
        91        23    0.0505     30463   66.8341 BERKMAN,_LISA
        92        23    0.0505     30486   66.8846 ARTEMYEFF,_C
        93        23    0.0505     30509   66.9351 BECKER,_AMY_B
        94        23    0.0505     30532   66.9855 BLANEY,_N_T
        95        23    0.0505     30555   67.0360 CARMINATI,_F
        96        23    0.0505     30578   67.0864 ADDANTE,_FILOMENA
        97        23    0.0505     30601   67.1369 BARON,_S_W
        98        23    0.0505     30624   67.1874 ANDERPECIVA,_S
        99        23    0.0505     30647   67.2378 CHANG,_LIJUN_(CHINESE_UNIV_HONG_KONG)
 ----------------------------------------------------------------
       Sum     45580   67.2378

We get a huge number of islands -- how to deal with them?