Is it possible to get the model scores?

[amber0309]

It is displayed in the printed info but I was wondering how I could get it from the tetradrunner() object?

I am running continuous fGES with 'sem-bic-score'. Thanks in advance!

[chirayukong]

It is possible. I'll come back with the solution.

[chirayukong]

You should get scores for the whole graph and each of its nodes by the following code:

import pandas as pd
from pycausal import search as s

data_dir = "https://raw.githubusercontent.com/bd2kccd/py-causal/master/data/charity.txt"
df = pd.read_table(data_dir, sep="\t")

tetrad = s.tetradrunner()
tetrad.run(algoId = 'fges', dfs = df, maxDegree = -1, faithfulnessAssumed = True, verbose = True)

graph = tetrad.getTetradGraph()
print('Graph BIC: {}'.format(graph.getAttribute('BIC')))

nodes = graph.getNodes()
for i in range(nodes.size()):
    node = nodes.get(i)
    print('Node {} BIC: {}'.format(node.getName(),node.getAttribute('BIC')))

[amber0309]

Thanks for your prompt reply!