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Are these error plots okay? #1980

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biadelbianco opened this issue Jul 2, 2024 · 2 comments
Closed

Are these error plots okay? #1980

biadelbianco opened this issue Jul 2, 2024 · 2 comments

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@biadelbianco
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Just want to know if these plots are fine or if is there any issue that need to be fixed.

errorplot.pdf

Here the quality plots as well

qualplot.pdf

My code for filterAndTrim

filterAndTrim(fnFs, filtFs, fnRs, filtRs, truncLen=c(270,240), trimLeft=c(17,21),
maxN=0, maxEE=c(2,5), truncQ=2, rm.phix=TRUE,
compress=TRUE, multithread=TRUE)

@benjjneb
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benjjneb commented Jul 4, 2024

Those error plots look fine.

@biadelbianco
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Thank you, benjjneb!

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