README.md

Usage

Initialize the project's workspace

from scratch

To initialize the signac project from scratch:

$ ./init.sh

This will create the folder structure corresponding to src/init.py, and delete any existing simulation results (see init.sh script for details).

existing data

If, instead of starting from scratch, one wants to add new simulations to an existing project, src/init.py should be used instead of init.sh:

$ python src/init.py

Run the project operations

parallel execution

To submit a SLURM job for N parallel fbpic simulations:

$ ./project.sh N

Notes

• all commands should be ran from the directory that contains this README file