[GNOCCHI-10] Adding CI scripts.

Resolves #10: * Run scalariform and fix license headers. * Deleting Gnocchi-test submodule. * Add coverage profile with support for pushing to coveralls. * Misc. pom.xml cleanup. * Scala 2.11 cannot have case classes without (). * Remove commented files.
bigdatagenomics · Mar 1, 2017 · 804a415 · 804a415
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diff --git a/Gnocchi-test/.gitignore b/Gnocchi-test/.gitignore
diff --git a/Gnocchi-test/pom.xml b/Gnocchi-test/pom.xml
diff --git a/Gnocchi-test/src/main/scala/org/maventest/App.scala b/Gnocchi-test/src/main/scala/org/maventest/App.scala
diff --git a/Gnocchi-test/src/test/scala/samples/junit.scala b/Gnocchi-test/src/test/scala/samples/junit.scala
diff --git a/Gnocchi-test/src/test/scala/samples/scalatest.scala b/Gnocchi-test/src/test/scala/samples/scalatest.scala
diff --git a/Gnocchi-test/src/test/scala/samples/specs.scala b/Gnocchi-test/src/test/scala/samples/specs.scala
diff --git a/LICENSE_header.txt b/LICENSE_header.txt
@@ -0,0 +1,15 @@
+Licensed to Big Data Genomics (BDG) under one
+or more contributor license agreements.  See the NOTICE file
+distributed with this work for additional information
+regarding copyright ownership.  The BDG licenses this file
+to you under the Apache License, Version 2.0 (the
+"License"); you may not use this file except in compliance
+with the License.  You may obtain a copy of the License at
+
+    http://www.apache.org/licenses/LICENSE-2.0
+
+Unless required by applicable law or agreed to in writing, software
+distributed under the License is distributed on an "AS IS" BASIS,
+WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+See the License for the specific language governing permissions and
+limitations under the License.
diff --git a/README.md b/README.md
@@ -1,5 +1,7 @@
 # gnocchi
 
+[![Coverage Status](https://coveralls.io/repos/github/bigdatagenomics/gnocchi/badge.svg?branch=master)](https://coveralls.io/github/bigdatagenomics/gnocchi?branch=master)
+
 Genotype-phenotype analysis using the [ADAM](https://github.com/bigdatagenomics/adam) genomics analysis platform.
 This is work-in-progress. Currently, we implement a simple case/control analysis using a Chi squared test.