The goseq
package provides a method to detect Gene Ontology and/or other user
defined categories which are over/under represented in RNA-seq data.
goseq
can be found on Bioconductor
(https://www.bioconductor.org/packages/goseq).
You can install the version of goseq
which is on Bioconductor with these commands:
if (!require("BiocManager")) {
install.packages("BiocManager")
}
BiocManager::install("goseq")
Alternatively, you can install the development version of goseq
from GitHub with:
library("remotes")
remotes::install_github("federicomarini/goseq")