DESCRIPTION

Package: goseq
Title: Gene Ontology analyser for RNA-seq and other length biased data
Version: 1.59.0
Date: 2024-06-08
Authors@R: 
    c(
        person(
            given = "Matthew", family = "Young", role = c("aut"), 
            email = "my4@sanger.ac.uk"
        ),
        person(
            given = "Nadia", family = "Davidson", role = c("aut"), 
            email = "nadia.davidson@mcri.edu.au"
        ),
        person(
            given = "Federico", family = "Marini", role = c("ctb", "cre"), 
            email = "marinif@uni-mainz.de", comment = c(ORCID = "0000-0003-3252-7758")
        )
    )
Description: Detects Gene Ontology and/or other user defined categories
    which are over/under represented in RNA-seq data.
Depends: 
    R (>= 2.11.0), 
    BiasedUrn, 
    geneLenDataBase (>= 1.9.2)
Imports: 
    mgcv, 
    graphics, 
    stats, 
    utils, 
    AnnotationDbi, 
    GO.db,
    BiocGenerics, 
    methods,
    rtracklayer, 
    GenomicFeatures, 
    GenomeInfoDb
Suggests: 
    edgeR, 
    org.Hs.eg.db
License: LGPL (>= 2)
URL: https://github.com/federicomarini/goseq
BugReports: https://github.com/federicomarini/goseq/issues
biocViews: 
    ImmunoOncology, Sequencing, GO, GeneExpression, Transcription, RNASeq,
    DifferentialExpression, Annotation, GeneSetEnrichment, KEGG, Pathways, 
    Software
RoxygenNote: 7.3.1
Encoding: UTF-8