DESCRIPTION

Package: mumosa
Type: Package
Authors@R: person("Aaron", "Lun", role = c("aut", "cre"), email="infinite.monkeys.with.keyboards@gmail.com")
Version: 1.15.0
Date: 2024-09-28
License: GPL-3
Title: Multi-Modal Single-Cell Analysis Methods
Description: 
    Assorted utilities for multi-modal analyses of single-cell datasets.
    Includes functions to combine multiple modalities for downstream analysis,
    perform MNN-based batch correction across multiple modalities,
    and to compute correlations between assay values for different modalities.
Depends: 
    SingleCellExperiment
Imports: 
    stats,
    utils,
    methods,
    igraph,
    Matrix,
    BiocGenerics,
    BiocParallel,
    IRanges,
    S4Vectors,
    DelayedArray,
    DelayedMatrixStats,
    SummarizedExperiment,
    BiocNeighbors,
    BiocSingular,
    ScaledMatrix,
    beachmat,
    scuttle,
    metapod,
    scran,
    batchelor,
    uwot
Suggests: 
    testthat,
    knitr,
    BiocStyle,
    rmarkdown,
    scater,
    bluster,
    DropletUtils,
    scRNAseq
VignetteBuilder: knitr
biocViews: ImmunoOncology, SingleCell, RNASeq
Encoding: UTF-8
RoxygenNote: 7.3.2
URL: http://bioconductor.org/packages/mumosa
BugReports: https://support.bioconductor.org/