Skip to content

Commit

Permalink
Update test suite
Browse files Browse the repository at this point in the history
  • Loading branch information
Daniel Standage committed Aug 22, 2023
1 parent 809a08e commit c9e1869
Show file tree
Hide file tree
Showing 8 changed files with 6,304 additions and 208 deletions.
4 changes: 2 additions & 2 deletions microhapdb/__init__.py
Original file line number Diff line number Diff line change
Expand Up @@ -43,10 +43,10 @@ def retrieve_by_id(ident):
>>> retrieve_by_id("mh17KK-014")
Name NumVars Extent Chrom Start End Positions Positions37 RSIDs Source Ae
2428 mh17KK-014 3 37 chr17 4497061 4497097 4497061;4497089;4497097 4400356;4400384;4400392 rs333113;rs8074965;rs11657785 Kidd2018 3.923
2592 mh17KK-014 3 37 chr17 4497061 4497097 4497061;4497089;4497097 4400356;4400384;4400392 rs333113;rs8074965;rs11657785 Kidd2018 3.923
>>> retrieve_by_id("rs8074965")
Name NumVars Extent Chrom Start End Positions Positions37 RSIDs Source Ae
2428 mh17KK-014 3 37 chr17 4497061 4497097 4497061;4497089;4497097 4400356;4400384;4400392 rs333113;rs8074965;rs11657785 Kidd2018 3.923
2592 mh17KK-014 3 37 chr17 4497061 4497097 4497061;4497089;4497097 4400356;4400384;4400392 rs333113;rs8074965;rs11657785 Kidd2018 3.923
>>> retrieve_by_id("Chagga")
ID Name Source
16 mMHseq-Chagga Chagga Gandotra2020
Expand Down
Binary file modified microhapdb/data/frequency.csv.gz
Binary file not shown.
Loading

0 comments on commit c9e1869

Please sign in to comment.