issue calling radtext.Pipeline()

[zakaria47fs]

I am using last commit on master branch,
calling the pipeline from radtext with this code,
import radtext
nlp = radtext.Pipeline()

falling to the following error:

loading model /Users/zakaria/.radtext/bllipparser/BLLIP-GENIA-PubMed ...
Traceback (most recent call last):
File "test.py", line 5, in
nlp = radtext.Pipeline()
File "../radtext/src/radtext/models/pipeline.py", line 98, in init
regex_actor.load_yml2(argv['--regex_patterns'])
File "../radtext/src/radtext/models/neg/match_regex.py", line 70, in load_yml2
for obj in objs['negation']:
KeyError: 'negation'

[Marshall-mk]

I am using last commit on master branch, calling the pipeline from radtext with this code, import radtext nlp = radtext.Pipeline()

falling to the following error:

loading model /Users/zakaria/.radtext/bllipparser/BLLIP-GENIA-PubMed ... Traceback (most recent call last): File "test.py", line 5, in nlp = radtext.Pipeline() File "../radtext/src/radtext/models/pipeline.py", line 98, in init regex_actor.load_yml2(argv['--regex_patterns']) File "../radtext/src/radtext/models/neg/match_regex.py", line 70, in load_yml2 for obj in objs['negation']: KeyError: 'negation'

I had a similar issue when I first installed the package. I then looked closely into the regex_pattern.yml file that --regex_patterns points to which is located inside $Home/.radtext/resources/patterns and discovered that it wasn't containing the correct text. It was in fact containing an error 404 code.

Here is what I did to solve the problem:

1. I cloned the repository in to my downloads folder and navigated in to C:\Users\HI\Downloads\radtext\resources\patterns.
2. I then copied two files regex_pattern.yml and ngrex_pattern.yml from 1 into $Home/.radtext/resources/patterns . It asked me to replace the existing ones which I did, and that resolved the issue.

NB: I use wsl on my pc so the location of $Home/.radtext/resources/patterns might be different from yours. However, you should just try to locate the directory where --regex_patterns points to and make the changes.