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final updates for release 1.0a4
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updated NEWS and README
setup.py has a new version
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jchang committed Dec 18, 2001
1 parent a1012fa commit 2785895
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24 changes: 24 additions & 0 deletions NEWS
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Expand Up @@ -4,6 +4,30 @@ News for the Biopython Project
This file contains release notes and general news
about the biopython project.

Biopython1.00a4
minor bug fix in NCBIStandalone.blastall
optimization in dynamic programming code
new modules for logistic regression and maximum entropy
minor bug fix in ParserSupport
minor bug fixes in SCOP package
minor updates in the kMeans cluster selection code
minor bug fixes in SubsMat code
support for XML-formatted MEDLINE files
added MultiProc.run to simplify splitting code across processors
listfns.items now supports lists with unhashable items
new data type for pathways
new support for intelligenetics format
new support for metatool format
new support for NBRF format
new support for generalized launching of applications
new support for genetic algorithms
minor bug fixes in GenBank parsing
new support for Primer in the Emboss package
new support for chromosome graphics
new support for HMMs
new support for NeuralNetwork
slew of Martel fixes (see Martel docs)

Sept 3, 2001: Biopython1.00a3
added package to support KEGG
added sequtils module for computations on sequences
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2 changes: 0 additions & 2 deletions README
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Expand Up @@ -128,8 +128,6 @@ setup.py -- Installation file.

- more regression tests

- Zope-ify the web site

- microarray data

If you see something here you would like to work on, please send mail
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2 changes: 1 addition & 1 deletion setup.py
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Expand Up @@ -229,7 +229,7 @@ def run(self):
all_packages.extend(martel_packages)

setup(name='biopython',
version='1.00a3',
version='1.00a4',
author='The Biopython Consortium',
author_email='biopython@biopython.org',
url='http://www.biopython.org/',
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