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Fixing minor defects.
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Fixed MafIndex not inheriting from object.

Fixed use of "+1" and "-1" to represent strands; changed to 1 and -1 (ints) like in Bio.SeqFeature.

Removed trailing whitespace in MafIO.py.
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@adamnovak @peterjc
adamnovak authored and peterjc committed Feb 13, 2017
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