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Bumping version number to Biopython 1.51b
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peterc committed Jun 23, 2009
1 parent c2bad97 commit 79c2c24
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2 changes: 1 addition & 1 deletion Bio/__init__.py
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http://biopython.org
"""

__version__ = "1.50+"
__version__ = "1.51b"

class MissingExternalDependencyError(Exception):
pass
8 changes: 5 additions & 3 deletions Doc/Tutorial.tex
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\author{Jeff Chang, Brad Chapman, Iddo Friedberg, Thomas Hamelryck, \\
Michiel de Hoon, Peter Cock, Tiago Ant\~ao}
\date{Last Update -- 16 June 2009 (Biopython 1.50+)}
\date{Last Update -- 23 June 2009 (Biopython 1.51 \textit{beta})}

%Hack to get the logo at the start of the HTML front page:
%(hopefully this isn't going to be too wide for most people)
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Disputably (of course!), the central object in bioinformatics is the sequence. Thus, we'll start with a quick introduction to the Biopython mechanisms for dealing with sequences, the \verb|Seq| object, which we'll discuss in more detail in Chapter~\ref{chapter:Bio.Seq}.
Most of the time when we think about sequences we have in my mind a string of letters like \verb|'AGTACACTGGT'|. You can create such \verb|Seq| object with this sequence as follows - the ``$>>>$'' represents the Python prompt followed by what you would type in:
Most of the time when we think about sequences we have in my mind a string of letters like `\verb|AGTACACTGGT|'. You can create such \verb|Seq| object with this sequence as follows - the ``$>>>$'' represents the Python prompt followed by what you would type in:
\begin{verbatim}
>>> from Bio.Seq import Seq
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>>> import subprocess
>>> import sys
>>> child = subprocess.Popen(str(cline),
... stdin=subprocess.PIPE,... stdout=subprocess.PIPE,... stderr=subprocess.PIPE,
... stdin=subprocess.PIPE,
... stdout=subprocess.PIPE,
... stderr=subprocess.PIPE,
... shell=(sys.platform!="win32"))
\end{verbatim}
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2 changes: 2 additions & 0 deletions NEWS
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===================================================================

June 23, 2009: Biopython 1.51 beta released.

Biopython no longer supports Python 2.3. Currently we support Python 2.4,
2.5 and 2.6.

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