Fix typos.

Bio/Align/Applications/_Prank.py

@@ -42,7 +42,7 @@ class PrankCommandline(AbstractCommandline):
     prevents errors in sequence alignment and evolutionary analysis.
     Science, 320: 1632.
 
-    Last checked agains version: 081202
+    Last checked against version: 081202
     """
     def __init__(self, cmd="prank", **kwargs):
         OUTPUT_FORMAT_VALUES = list(range(1,18))

Bio/Align/Applications/_Probcons.py

@@ -51,7 +51,7 @@ class ProbconsCommandline(AbstractCommandline):
     PROBCONS: Probabilistic Consistency-based Multiple Sequence Alignment.
     Genome Research 15: 330-340.
 
-    Last checked agains version: 1.12
+    Last checked against version: 1.12
     """
     def __init__(self, cmd="probcons", **kwargs):
         self.parameters = \

Tests/test_Emboss.py

@@ -133,7 +133,7 @@ def emboss_piped_SeqIO_convert(records, old_format, new_format):
     SeqIO.write(records, child.stdin, old_format)
     child.stdin.close()
     child.stderr.close()
-    #TODO - Is there a nice way to return an interator AND
+    #TODO - Is there a nice way to return an iterator AND
     #automatically close the handle?
     records = list(SeqIO.parse(child.stdout, new_format))
     child.stdout.close()
@@ -165,7 +165,7 @@ def emboss_piped_AlignIO_convert(alignments, old_format, new_format):
         raise
     child.stdin.close()
     child.stderr.close()
-    #TODO - Is there a nice way to return an interator AND
+    #TODO - Is there a nice way to return an iterator AND
     #automatically close the handle?
     try:
         aligns = list(AlignIO.parse(child.stdout, new_format))