updated list of packages

biopython · Dec 17, 2002 · 975ac54 · 975ac54
1 parent 79173dc
commit 975ac54
Showing 1 changed file with 19 additions and 18 deletions.
diff --git a/setup.py b/setup.py
@@ -167,21 +167,31 @@ def run(self):
 # standard biopython packages
 biopython_packages = ['Bio',
                       'Bio.Ais',
+                      'Bio.Ais.Examples',
                       'Bio.Align',
                       'Bio.Alphabet',
                       'Bio.Application',
-                      'Bio.Application',
                       'Bio.Blast',
+                      'Bio.builders',
+                      'Bio.builders.Search',
+                      'Bio.builders.SeqRecord',
                       'Bio.CDD',
                       'Bio.Clustalw',
+                      'Bio.config',
                       'Bio.Crystal',
                       'Bio.Data',
-                      'Bio.Emboss',
+                      'Bio.dbdefs',
                       'Bio.ECell',
+                      'Bio.Emboss',
                       'Bio.Encodings',
                       'Bio.Enzyme',
-                      'Bio.FSSP',
+                      'Bio.expressions',
+                      'Bio.expressions.blast',
+                      'Bio.expressions.embl',
+                      'Bio.expressions.swissprot',
                       'Bio.Fasta',
+                      'Bio.formatdefs',
+                      'Bio.FSSP',
                       'Bio.GA',
                       'Bio.GA.Crossover',
                       'Bio.GA.Mutation',
@@ -195,13 +205,13 @@ def run(self):
                       'Bio.HMM',
                       'Bio.IntelliGenetics',
                       'Bio.InterPro',
+                      'Bio.Kabat',
                       'Bio.KDTree',
                       'Bio.KEGG',
                       'Bio.KEGG.Compound',
                       'Bio.KEGG.Enzyme',
                       'Bio.KEGG.Map',
-                      'Bio.Kabat',
-                      'Bio.LocusLink',
+                      #'Bio.LocusLink',
                       'Bio.Medline',
                       'Bio.MetaTool',
                       'Bio.Mindy',
@@ -211,33 +221,24 @@ def run(self):
                       'Bio.NeuralNetwork',
                       'Bio.NeuralNetwork.BackPropagation',
                       'Bio.NeuralNetwork.Gene',
-                      'Bio.PDB',
                       'Bio.Parsers',
                       'Bio.Pathway',
                       'Bio.Pathway.Rep',
+                      'Bio.PDB',
                       'Bio.Prosite',
                       'Bio.Rebase',
                       'Bio.Saf',
                       'Bio.SCOP',
-                      'Bio.SVDSuperimposer',
+                      'Bio.SCOP.tests',
                       'Bio.SeqIO',
                       'Bio.SeqUtils',
                       'Bio.SubsMat',
+                      'Bio.SVDSuperimposer',
                       'Bio.SwissProt',
                       'Bio.UniGene',
-                      'Bio.WWW',
-                      'Bio.builders',
-                      'Bio.builders.Search',
-                      'Bio.builders.SeqRecord',
-                      'Bio.config',
-                      'Bio.dbdefs',
-                      'Bio.expressions',
-                      'Bio.expressions.blast',
-                      'Bio.expressions.embl',
-                      'Bio.expressions.swissprot',
-                      'Bio.formatdefs',
                       'Bio.writers',
                       'Bio.writers.SeqRecord'
+                      'Bio.WWW',
                       ]
 
 # Martel -- for building parsers