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  1. BitLib BitLib Public

    Provides a bit-vector, an optimized replacement of the infamous std::vector<:b:ool>. In addition to the bit-vector, the library also provides implementations of STL algorithms tailored for bit-vect…

    C++ 65 3

  2. marbl/MashMap marbl/MashMap Public

    A fast approximate aligner for long DNA sequences

    C++ 258 38

  3. marbl/parsnp marbl/parsnp Public

    Parsnp was designed to align the core genome of hundreds to thousands of bacterial genomes within a few minutes to few hours. Input can be both draft assemblies and finished genomes, and output inc…

    C++ 117 24

  4. RUSH-LAB/RAMBO RUSH-LAB/RAMBO Public

    Makefile 19 2