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ConvertPhyAndFlowToPhygraph failing #16

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bomeara opened this issue Jul 30, 2018 · 1 comment
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ConvertPhyAndFlowToPhygraph failing #16

bomeara opened this issue Jul 30, 2018 · 1 comment
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@bomeara @djhwueng
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bomeara commented Jul 30, 2018 

data("nicotiana")
  p <- BMhyb:::ConvertPhyAndFlowToPhygraph(nicotiana$phy, nicotiana$flow)

Creates an object that looks right, but when plotting causes R to abort. Probably something to do with the numbering or ordering of the p$edge object.

plot(ConvertEvonetToIgraphWithNodeNumbers(p), vertex.shape="none")

works but the resulting object looks like the flow is all running the wrong way: out of taxon 1, for example.
@bomeara bomeara added the bug label Jul 30, 2018
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bomeara commented Aug 6, 2018

Fixed now

@bomeara bomeara closed this as completed Aug 6, 2018
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