indexcov: select or view individual sample tracks

[fakedrtom]

When dealing with many samples, the bam coverage plots in indexcov quickly become rather noisy. Currently I can try and highlight tracks to get the sample, but this doesn't always distinguish the track from all the others. Curious if there might be a way to deselect sample tracks or rather just select the desired samples that you want to view for more individualized inspection? In my case I was hoping to view specific samples for potential large-scale duplications or deletions. Or maybe some kind of zoom in feature or something like that would suffice.

[brwnj]

hijacking this to suggest trying covviz on your indexes (https://github.com/brwnj/covviz). If there's a region that significantly differs from the population, that section will be highlighted. An interactive example is available at https://brwnj.github.io/covviz/.

[brentp]

solved.