Skip to content
View brwnj's full-sized avatar
👈
👈
  • Labcorp
  • Portland, OR
  • 16:34 (UTC -08:00)

Organizations

@BigelowLab @bioconda @metagenome-atlas

Block or report brwnj

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
brwnj/README.md

Streamlining clinical bioinformatics workflows in production environments.

Pinned Loading

  1. quinlan-lab/bedqc quinlan-lab/bedqc Public

    BED QC tool (in the making)

    HTML 15 1

  2. brentp/seqcover brentp/seqcover Public

    seqcover allows users to view coverage for hundreds of genes and dozens of samples

    Nim 50 4

  3. covviz covviz Public

    Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata

    HTML 56 7

  4. covdist covdist Public

    simple coverage distribution profile of aligned samples. useful for sequencing center feedback and topoffs.

    HTML 4 1

  5. idplot idplot Public

    compare sequences to a shared root reference sequence.

    HTML 24 4

  6. smoove-nf smoove-nf Public

    Nextflow implementation of the smoove workflow and other tools for SV calling and QC

    Python 12 2