Fix case sensitivity issue in VariantHeaderBuilder that was preventin…

…g shared/individual field types from getting set Quick fix needed by Joel
broadinstitute · Oct 2, 2014 · 3e0460b · 3e0460b
1 parent 94dafe5
commit 3e0460b
Showing 1 changed file with 6 additions and 6 deletions.
diff --git a/gamgee/variant_header_builder.cpp b/gamgee/variant_header_builder.cpp
@@ -43,11 +43,11 @@ VariantHeaderBuilder& VariantHeaderBuilder::add_filter(const string& id, const s
 
 VariantHeaderBuilder& VariantHeaderBuilder::add_shared_field(const string& id, const string& number, const string& type, const string& description, const string& source, const string& version, const string& extra) {
   auto s = string{"##INFO=<ID=" + id};
-  s.append(required_parameter("number=", number));
-  s.append(required_parameter("type=", type));
+  s.append(required_parameter("Number=", number));
+  s.append(required_parameter("Type=", type));
   s.append(optional_parameter("Description=", description));
-  s.append(optional_parameter("source=", source));
-  s.append(optional_parameter("version=", version));
+  s.append(optional_parameter("Source=", source));
+  s.append(optional_parameter("Version=", version));
   s.append(optional_parameter("", extra));
   s.append(">");
   bcf_hdr_append(m_header.get(), s.c_str());
@@ -56,8 +56,8 @@ VariantHeaderBuilder& VariantHeaderBuilder::add_shared_field(const string& id, c
 
 VariantHeaderBuilder& VariantHeaderBuilder::add_individual_field(const string& id, const string& number, const string& type, const string& description, const string& extra) {
   auto s = string{"##FORMAT=<ID=" + id};
-  s.append(required_parameter("number=", number));
-  s.append(required_parameter("type=", type));
+  s.append(required_parameter("Number=", number));
+  s.append(required_parameter("Type=", type));
   s.append(optional_parameter("Description=", description));
   s.append(optional_parameter("", extra));
   s.append(">");