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Fixed model parameter assignment typo in gCNV ploidy model #6285

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merged 1 commit into from
Nov 26, 2019

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asmirnov239
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@samuelklee Could you review please?

@samuelklee samuelklee merged commit 8a365d1 into master Nov 26, 2019
@samuelklee samuelklee deleted the as_gcnv_ploidy_model_bug_fix branch November 26, 2019 09:53
@samuelklee
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Hmm, perhaps we should consider an additional PR to either set the default value to give the old behavior (i.e., equal to the ‘psi_j_scale’ default) or change all defaults for all parameters to whatever we are using now. Either way, we should mention in the release notes that models may need to be refit @mwalker174.

@mwalker174
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Definitely should inform users to refit their models in the release notes. I think we should discuss changes to parameter defaults in our next meeting.

@samuelklee
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Maybe we can bump gcnvkernel version, which will check the model version in CASE mode.

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3 participants