[GH-1624] Rename covid -> staged #580
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Most places where we refer to COVID workloads, we are dealing in generic staged workloads with other applications.
* Update reitit. * Reduce cleverness. * Expose the logging_level API. * Add logging_level endpoints. * Fix bug in level-string? ... jeez. * Add logging_level endpoint test. * clojure -M:format` in this directory. * Respond to OK's comments.
tbl3rd
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okotsopoulos
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GH-1629 TerraExecutor gets method configuration version from Firecloud (#585) GH-1553 GH-1604 Add error handling to Slack service (#584) GH-1628 Look at the first 7 workloads returned in test-workflows-by-filters. (#583) GH-1617 Consistent workload representation for logs (#579) GH-1624 Rename covid -> staged in code, docs (#580)
okotsopoulos
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Mar 7, 2022
GH-1629 TerraExecutor gets method configuration version from Firecloud (#585) GH-1553 GH-1604 Add error handling to Slack service (#584) GH-1628 Look at the first 7 workloads returned in test-workflows-by-filters. (#583) GH-1617 Consistent workload representation for logs (#579) GH-1624 Rename covid -> staged in code, docs (#580)
okotsopoulos
added a commit
that referenced
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Mar 7, 2022
GH-1629 TerraExecutor gets method configuration version from Firecloud (#585) GH-1553 GH-1604 Add error handling to Slack service (#584) GH-1628 Look at the first 7 workloads returned in test-workflows-by-filters. (#583) GH-1617 Consistent workload representation for logs (#579) GH-1624 Rename covid -> staged in code, docs (#580)
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Purpose
The first application of generic staged workload architecture was COVID sequencing in Terra. Naming in our code and public-facing documentation reflected this.
Changes
System Tests
Passed:
Review Instructions
If you wish, you could spin up a local docsite to review the docsite changes. I did this to confirm formatting and that links worked.