TREC 2017 Precision Medicine (imi_mug)

NOTE Maintenance of this project has moved to the JULIE Lab.

A repository containing support code and resources from the Institute for Medical Informatics, Statistics and Documentation at the Medical University of Graz (Austria) participation at the 2017 TREC Precision Medicine / Clinical Decision Support Track. For further information on this track and the final results please check the official TREC-PM 2017 overview paper. Team name: imi_mug

If you use data or code in your work, please cite our TREC 2017 proceedings paper:

TREC 2017 Precision Medicine - Medical University of Graz. Pablo López-García, Michel Oleynik, Zdenko Kasáč and Stefan Schulz. Text REtrieval Conference, Gaithersburg, MD. 2017. Available at https://trec.nist.gov/pubs/trec26/papers/imi_mug-PM.pdf.

The complete TREC 2017 proceedings are available here.

Also of interest:

• Our TREC 2017 presentation slides
• Our TREC 2017 Poster

Code Dependencies

• JDK 8+
• maven
• make (for trec_eval tool)
• gcc (for trec_eval tool)
• Elasticsearch 5.4.0+