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Update current study nst_nfosi_ntap with new samples, data #2034

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anngvu opened this issue May 22, 2024 · 0 comments · May be fixed by #2035
Open
9 tasks

Update current study nst_nfosi_ntap with new samples, data #2034

anngvu opened this issue May 22, 2024 · 0 comments · May be fixed by #2035

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@anngvu
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anngvu commented May 22, 2024

This is not a new study. We're just adding more samples and additional data modality.

  • create an issue on datahub before curating a study (one issue per study) and copy this checklist to the issue tracker
  • List information of the dataset/paper in the issue, e.g. pmid, paper link, suppl file link
  • Document the curation process, e.g. how and by whom the data was transformed
  • Follow the data checklist
  • Create a pull request to datahub once the data is curated
  • Push to triage portal
  • Import into msk and public portal database
  • Update the default quick select study list see options for selecting tcga + non-tcga studies cbioportal#5831 (only for studies that are not overlapping with existing ones; only for human tumors, not cell lines)
  • Update cBioPortal news
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