'sqm -h' fails

[jchodera]

conda build ambermini now fails with

+ sqm -h

     Error unknown flag: -h                                                                              

which is odd, since this worked fine in AmberTools 14:

[LSKI1497:~] choderaj% sqm -h
sqm [-O] -i <input> -o <output>
   -O           Overwrite output file if it exists
   -i <input>   Input file
   -o <output>  Output file
   -h           Show this message

[swails]

Actually it didn't. That flag was unique to ambermini. See af436ce

A lot of these kinds of tweaks I made to the actual source code (not the shell script wrappers designed to circumvent the AMBERHOME requirement) got wiped out when I blindly copied AT 15 to ambermini.

I'm going back and adding these modifications back to the main git repo so this doesn't happen again. I had forgotten how many tweaks I made...

[jchodera]

Awesome, thanks!

J

[swails]

Should be fixed.