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hello , i do the Minigraph-Cactus successfully and get the file of gfa ,but when i want to use the "pangenome-growth" to get picture,
do this :grep '^P' hprc-v1.0-mc-grch38.gfa | cut -f2 | grep -ie 'grch38' > hprc-v1.0-mc-grch38.paths.grch38.txt.
my code grep '^P' pangenome.gfa.gz | cut -f2 | grep -ie 'che' > paths.txt
and i my result is zero
i found it maybe the file of gfa is not exit the "path"?
-can you help me ?thank you so much!!!
my file like this
the example like this
The text was updated successfully, but these errors were encountered:
hello , i do the Minigraph-Cactus successfully and get the file of gfa ,but when i want to use the "pangenome-growth" to get picture,
do this :
grep '^P' hprc-v1.0-mc-grch38.gfa | cut -f2 | grep -ie 'grch38' > hprc-v1.0-mc-grch38.paths.grch38.txt
.my code
grep '^P' pangenome.gfa.gz | cut -f2 | grep -ie 'che' > paths.txt
-can you help me ?thank you so much!!!
my file like this
the example like this
The text was updated successfully, but these errors were encountered: