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Not compatible with python 3.10 #10969

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isuruf opened this issue Oct 6, 2021 · 1 comment · Fixed by #10970
Closed
4 tasks done

Not compatible with python 3.10 #10969

isuruf opened this issue Oct 6, 2021 · 1 comment · Fixed by #10970
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@jezdez @chenghlee
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locked [bot] locked due to inactivity severity::1 blocker; broken functionality with no workaround source::community catch-all for issues filed by community members tag::compatibility related to compatibility issues with other software type::bug describes erroneous operation, use severity::* to classify the type
Milestone
4.11.0

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@isuruf
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isuruf commented Oct 6, 2021

Checklist

  • I added a descriptive title
  • I searched for other issues and couldn't find a solution or duplication
  • I already searched in Google and didn't find any good information or help
  • I looked at the docs and didn't see anything to help

What happened?

python 3.10 is the find version with two digits in the minor version.
conda doesn't seem to like it. In particular, noarch: python packages
seem to get installed to lib/python/3.1/site-packages instead of
lib/python/3.10/site-packages.

See

conda/conda/common/path.py

Line 181 in 33a142c

def get_major_minor_version(string, with_dot=True):

Conda info

No response

Conda config

No response

Conda list

No response

Additional Context

No response
@isuruf isuruf added the type::bug describes erroneous operation, use severity::* to classify the type label Oct 6, 2021
@isuruf isuruf mentioned this issue Oct 6, 2021
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@chenghlee chenghlee added severity::1 blocker; broken functionality with no workaround source::community catch-all for issues filed by community members labels Oct 6, 2021
@isuruf isuruf mentioned this issue Oct 6, 2021
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@isuruf
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isuruf commented Oct 6, 2021

PR at #10970

@chenghlee chenghlee added the tag::compatibility related to compatibility issues with other software label Oct 6, 2021
@isuruf isuruf mentioned this issue Oct 7, 2021
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@tibdex tibdex mentioned this issue Oct 8, 2021
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chrisburr added a commit to chrisburr/python-feedstock that referenced this issue Oct 8, 2021
@chrisburr
Add workaround for conda/conda#10969
5983d03
@chrisburr chrisburr mentioned this issue Oct 8, 2021
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chrisburr added a commit to chrisburr/python-feedstock that referenced this issue Oct 8, 2021
@chrisburr
Add workaround for conda/conda#10969
f8af9ee
chrisburr added a commit to chrisburr/python-feedstock that referenced this issue Oct 8, 2021
@chrisburr
Add workaround for conda/conda#10969
c356b2a
isuruf added a commit to conda-forge/python-feedstock that referenced this issue Oct 9, 2021
@isuruf
Merge pull request #511 from chrisburr/workaround-conda-10969
d75f770 
Add workaround for conda/conda#10969
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asottile added a commit to pre-commit/pre-commit that referenced this issue Oct 12, 2021
@asottile
work around conda bug installing python3.1/site-packages
8c844c7 
conda/conda#10969
@chenghlee chenghlee added this to the 4.11.0 milestone Oct 13, 2021
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@chrisburr @mbargull
Add workaround for conda/conda#10969
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@vladsavelyev
Stick to py3.9. See conda/conda#10969
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vladsavelyev added a commit to populationgenomics/hail that referenced this issue Feb 22, 2022
@vladsavelyev @illusional
Build for pypi instead of conda (#131)
4d16aa7 
* Conda env: more missing packages and changed version pins

* CI: build conda package on pull requests, but upload only on push to main

* Build in py 3.10 enviornment

* Stick to py3.9. See conda/conda#10969

* Conda: avro -> python-avro

* Build pip instead of conda

* Render conda recipe from pip requirements

* Drop the pypi package

* Render SPARK_VERSION before building recipe

* Setup conda before rendering recipe to make sure py3 is activated

* Conda: upload macos as well

* Conda: build for py310

* Build for py310

* Build for py39 and py310

* Small fix

* Remove trailing space

* Update conda/render_recipe.py

Co-authored-by: Michael Franklin <michael@illusional.net>

* Update conda/render_recipe.py

Co-authored-by: Michael Franklin <michael@illusional.net>

* Drop conda, replace with pip

* GH workflow: setup java and pin python

* Fix

* Fix

* Java 8

* Use twine action

* Fix

* Install package for test

* Fix

* Remove fix-conda2 branch

* Fix

* Add back macos-latest

* Build only on ubuntu

* Add comments, rename to build.yaml

* Rename back

* Rename to package.yaml

Co-authored-by: Michael Franklin <michael@illusional.net>
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@github-actions github-actions bot added the locked [bot] locked due to inactivity label Oct 14, 2022
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@jezdez jezdez

@chenghlee chenghlee

Labels
locked [bot] locked due to inactivity severity::1 blocker; broken functionality with no workaround source::community catch-all for issues filed by community members tag::compatibility related to compatibility issues with other software type::bug describes erroneous operation, use severity::* to classify the type
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Milestone
4.11.0
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support python 3.10 isuruf/conda
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@jezdez @chenghlee @isuruf