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I already generated loom files using velocyto from cellranger filtered matrix and bam files. Now if I am interested in running SoupX, do I need to rerun velocyto after obtaining the corrected matrix from SoupX?
The text was updated successfully, but these errors were encountered:
I have very basic questions.
I already generated loom files using velocyto from cellranger filtered matrix and bam files. Now if I am interested in running SoupX, do I need to rerun velocyto after obtaining the corrected matrix from SoupX?
The text was updated successfully, but these errors were encountered: