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When I run these code:
sc = setContaminationFraction(sc, 0.2)
out = adjustCounts(sc)
I got an error:
Error in sparseMatrix(i = out@i[w] + 1, j = out@j[w] + 1, x = out@x[w], :
(converted from warning) 'giveCsparse' is deprecated; setting repr="T" for you
The packages I used are as below: Seurat(v4.4.0), Soupx(v1.6.2)
I searched this error in the "issues" part, but I didn't find the same error that anyone who have met.
So, is there anything wrong with the version of packages I'm using?
The text was updated successfully, but these errors were encountered:
Hi,
thanks for developing such a powerful tool.
When I run these code:
sc = setContaminationFraction(sc, 0.2)
out = adjustCounts(sc)
I got an error:
Error in sparseMatrix(i = out@i[w] + 1, j = out@j[w] + 1, x = out@x[w], :
(converted from warning) 'giveCsparse' is deprecated; setting repr="T" for you
The packages I used are as below: Seurat(v4.4.0), Soupx(v1.6.2)
I searched this error in the "issues" part, but I didn't find the same error that anyone who have met.
So, is there anything wrong with the version of packages I'm using?
The text was updated successfully, but these errors were encountered: