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Implement Similarity network fusion #49

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shntnu opened this issue Aug 25, 2017 · 4 comments
Closed

Implement Similarity network fusion #49

shntnu opened this issue Aug 25, 2017 · 4 comments

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@shntnu
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shntnu commented Aug 25, 2017

http://www.nature.com/nmeth/journal/v11/n3/full/nmeth.2810.html

@cells2numbers
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I tested and used the implementation from Max Conway

https://github.com/maxconway/SNFtool/blob/master/R/SNF.R

Could it be added as an dependency?

@shntnu
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shntnu commented Aug 25, 2017

@cells2numbers sounds good! But have a look at http://r-pkgs.had.co.nz/description.html#dependencies to decide the level of the dependency.

@cells2numbers
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example vignette showing the usage of SNF can be found in cytominergallery, see cytomining/cytominergallery#43

@shntnu
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shntnu commented Aug 26, 2017

Will track in cytomining/cytominergallery#43

@shntnu shntnu closed this as completed Aug 26, 2017
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