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FPKM value in the bed file #1

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Kapeel opened this issue Jan 4, 2017 · 0 comments

Kapeel commented Jan 4, 2017

Hi,

Does this script provide FPKM value in the output bed file.

Here is my sample output, not sure if the FPKM value in the file is captured in output bed file.

==> test.bed <==
1 2163 2829 STRG.1.1 1000 + 0 0 0,0,0 1 666 0 STRG.1 STRG.1 - - -
1 11417 14814 STRG.2.1 1000 - 0 0 0,0,0 11 327,84,261,98,106,89,123,272,104,96,99 0,444,687,1484,1690,1889,2073,2432,2812,3116,3298 STRG.2 STRG.2 - - -

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