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Changed status from running to failed.
Traceback (most recent call last):
File "/home/ns5bc/code/dnameth_pipelines/src/rrbs.py", line 677, in <module>
main(sys.argv[1:])
File "/home/ns5bc/code/dnameth_pipelines/src/rrbs.py", line 569, in main
pm.run(epi_cmd, nofail=True)
File "/home/ns5bc/.local/lib/python2.7/site-packages/pypiper/manager.py", line 611, in run
"You must provide either a target or a lock_name."))
File "/home/ns5bc/.local/lib/python2.7/site-packages/pypiper/manager.py", line 1575, in fail_pipeline
raise e
Exception: You must provide either a target or a lock_name.
The text was updated successfully, but these errors were encountered:
Yeah the eventual solution will rely on what's implemented in the tool itself. In the meantime, the solution would be something like os.path.join(<outfolder>, "all_calls.txt") as the target
The text was updated successfully, but these errors were encountered: