Pinned

1. pepatac Public

   A modular, containerized pipeline for ATAC-seq data processing

   R 48 10

2. COCOA Public

   Annotating epigenetic variation among samples with region sets in R

   R 10

3. LOLAweb Public

   An interactive Shiny web application for genomic interval enrichment analysis using LOLA.

   R 15 4

4. awesome-atac-analysis Public

   Links to ATAC-seq analysis tools

   41 6

5. MIRA Public

   R package for Methylation-based Inference of Regulatory Activity

   R 11 1

6. pypiper Public

   Python toolkit for building restartable pipelines

   Python 40 9