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Solving problems in computational biology


  1. pepatac Public

    A modular, containerized pipeline for ATAC-seq data processing

    R 48 10

  2. COCOA Public

    Annotating epigenetic variation among samples with region sets in R

    R 10

  3. LOLAweb Public

    An interactive Shiny web application for genomic interval enrichment analysis using LOLA.

    R 15 4

  4. Links to ATAC-seq analysis tools

    41 6

  5. MIRA Public

    R package for Methylation-based Inference of Regulatory Activity

    R 11 1

  6. pypiper Public

    Python toolkit for building restartable pipelines

    Python 40 9


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