fix len(filter(...)) issue in python3, fix #150

databio · May 7, 2019 · 3fb4f00 · 3fb4f00
1 parent 9701096
commit 3fb4f00
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/example_pipelines/count_reads.py b/example_pipelines/count_reads.py
@@ -93,7 +93,7 @@
 
 # And then count the number of reads in the file
 
-n_input_files = len(filter(bool, local_input_files))
+n_input_files = len(list(filter(bool, local_input_files)))
 
 raw_reads = sum([int(ngstk.count_reads(input_file, args.paired_end)) 
                 for input_file in local_input_files]) / n_input_files