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@nsheff
nsheff Merge pull request #181 from databio/hotfix_12
5fa2d14 Jan 25, 2022
Merge pull request #181 from databio/hotfix_12 
Hotfix 0.12.3
5fa2d14

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.github/workflows
enable action workflow dispatch
January 25, 2022 16:23
docs
update version to 0.12.3
January 25, 2022 15:46
docs_jupyter
Merge branch 'master' of github.com:databio/pypiper into dev
April 29, 2019 10:44
example_pipelines
use logmuse in earnest
July 18, 2019 17:31
pypiper
Dicts are now ordered by default
January 25, 2022 16:54
requirements
require pytest-remotedata
January 25, 2022 16:46
tests
skip broken test
December 20, 2021 20:12
.gitignore
pass test. Fix #146
May 1, 2019 13:55
.travis.yml
coveage and coveralls
February 1, 2019 14:04
LICENSE.txt
Create LICENSE.txt
June 25, 2018 17:23
MANIFEST.in
Packaging for pypi
February 27, 2018 14:40
README.md
Update README.md
May 2, 2019 13:51
design-notes.md
a few doc changes
December 5, 2017 17:58
init_interactive.py
start interactive module
August 24, 2017 17:23
logo_pypiper.svg
add svg
December 13, 2017 18:05
mkdocs.yml
update docs.
March 21, 2019 11:43
setup.cfg
facilitate python setup.py test; upgrade pytest to work around more-i…
February 19, 2019 13:18
setup.py
rename requirements files like other pkgs
January 25, 2022 15:51

README.md

Pypiper logo

Pypiper

Documentation Status Build Status

A lightweight python toolkit for gluing together restartable, robust shell pipelines. Learn more in the documentation.

About

Python toolkit for building restartable pipelines

pypiper.databio.org

Topics

python bioinformatics pipeline bioinformatics-pipeline python-toolkit

Resources

Readme

License

BSD-2-Clause license

Stars

35 stars

Watchers

15 watching

Forks

9 forks

Releases 22

v0.12.3 Latest
Jan 25, 2022
+ 21 releases

Packages

No packages published

Used by 22

  • @JackCurragh
  • @databio
  • @mskcc-omics-workflows
  • @mskcc-omics-workflows
  • @maverick1872
  • @snyk
  • @leipzig
+ 14

Contributors 11

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