remodel profile.tsv file, addresses #144

databio · May 8, 2019 · ee2abe3 · ee2abe3
1 parent 535a4c7
commit ee2abe3
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/pypiper/manager.py b/pypiper/manager.py
@@ -1126,10 +1126,10 @@ def _report_profile(self, command, lock_name, elapsed_time, memory):
         """
         Writes a string to self.pipeline_profile_file.
         """
-        message_raw = str(command) + "\t " + \
-            str(lock_name) + "\t" + \
+        message_raw = str(command) + "\t" + \
             str(datetime.timedelta(seconds = round(elapsed_time, 2))) + "\t " + \
-            str(memory)
+            str(memory)  + "\t" + \
+            str(os.path.relpath(lock_name, self.outfolder))
 
         with open(self.pipeline_profile_file, "a") as myfile:
             myfile.write(message_raw + "\n")