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I ran nesvor segment-stack --input-stacks volumes/case2_day1_stack.nii.gz --output-stack-masks volumes/case2_day1_mask.nii.gz but the downloaded checkpoint (nesvor/preprocessing/masking/brain_segmentation.py) is completely wrong and all keys are unexpected.
The text was updated successfully, but these errors were encountered:
Hi @Edenzzzz, did you use the docker or install NeSVoR from source? The segmentation model (i.e., MONAIfbs) uses monai v0.3.0. Could you check if your version of monai is too high?
I ran
nesvor segment-stack --input-stacks volumes/case2_day1_stack.nii.gz --output-stack-masks volumes/case2_day1_mask.nii.gz
but the downloaded checkpoint (nesvor/preprocessing/masking/brain_segmentation.py) is completely wrong and all keys are unexpected.The text was updated successfully, but these errors were encountered: