Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

[interhelp #31045] GFF3 output misses the e-value for PANTHER, PROSITE, HAMAP and PRINTS matches #55

Closed
GoogleCodeExporter opened this issue Jul 24, 2015 · 2 comments
Closed

[interhelp #31045] GFF3 output misses the e-value for PANTHER, PROSITE, HAMAP and PRINTS matches #55

GoogleCodeExporter opened this issue Jul 24, 2015 · 2 comments
Labels
auto-migrated Priority-Medium Type-Defect

Comments

@GoogleCodeExporter
Copy link 

InterProScan version 5.7-48.0 and earlier:

For some match types the e-value is missing in the score column of the GFF3 
output format.

e.g. for PANTHER matches:
Q97R95  PANTHER protein_match   2   363 .   +   .   Name=PTHR11063:SF6;Target=Q97R95 2 
363;status=T;ID=match$3_2_363;date=13-11-2014

Original issue reported on code.google.com by Maxim.Sc...@gmail.com on 13 Nov 2014 at 3:47
@GoogleCodeExporter
Copy link
Author

Original comment by Maxim.Sc...@gmail.com on 13 Nov 2014 at 3:48

  • Changed title: [interhelp #31045] GFF3 output misses the e-value for PANTHER, PROSITE, HAMAP and PRINTS matches

@GoogleCodeExporter
Copy link
Author

Original comment by Maxim.Sc...@gmail.com on 13 Nov 2014 at 4:03

  • Changed state: Fixed

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
auto-migrated Priority-Medium Type-Defect
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@GoogleCodeExporter