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Primex used wrong blast db for sus scrofa

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tjakobi committed Nov 18, 2019
1 parent 1e44959 commit 6aa945a7208641b25665a327ebaab2df30f5ed96
Showing with 1 addition and 1 deletion.
  1. +1 −1 circtools/primex/primex.py
@@ -80,7 +80,7 @@ def call_blast(self, input_file, organism):
elif organism == "rn":
blast_db = self.rattus_norvegicus_blast_db
elif organism == "ss":
blast_db = self.rattus_norvegicus_blast_db
blast_db = self.sus_scrofa_blast_db

return_handle = NCBIWWW.qblast("blastn",
blast_db,

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