Primex used wrong blast db for sus scrofa

dieterich-lab · Nov 18, 2019 · 6aa945a · 6aa945a
1 parent 1e44959
commit 6aa945a
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/circtools/primex/primex.py b/circtools/primex/primex.py
@@ -80,7 +80,7 @@ def call_blast(self, input_file, organism):
         elif organism == "rn":
             blast_db = self.rattus_norvegicus_blast_db
         elif organism == "ss":
-            blast_db = self.rattus_norvegicus_blast_db
+            blast_db = self.sus_scrofa_blast_db
 
         return_handle = NCBIWWW.qblast("blastn",
                                        blast_db,