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how to filter using vcf from multiple samples generated by mpileup2somatic #67

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weiydcn opened this issue Feb 19, 2024 · 0 comments
Open

how to filter using vcf from multiple samples generated by mpileup2somatic #67

weiydcn opened this issue Feb 19, 2024 · 0 comments

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@weiydcn
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weiydcn commented Feb 19, 2024

We conduct mpileup2somatic call variants from 17 sample(the first one is normal sample, the others are somatic samples)
Now, we want to filter the vcf using varscan , but seems the vcf file of multiple samples could not been uesd as input file directly?
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