NEWS

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LESYMAP v0.0.0.9221 (Release date: 2019-07-30)
  - Fixed compatibility with ANTsR: is.na(mask) -> is.na(c(mask))
  - Minor display info fix

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LESYMAP v0.0.0.9220 (Release date: 2019-07-19)
  - Added compiled TTfast function, 60x faster on full matrices
  - Enabled default faster runs for method='ttest'
  - Added slower method='ttestslow' for backward compatibility
  - Added lesymap.predict to make predictions of new cases using lesymap model
  - Enabled analyses of non-binary (continuous) voxel values
  - Switched to default binaryCheck=TRUE
  - Fixed bug that didn't allow method='svr' calls

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LESYMAP v0.0.0.9210 (Release date: 2019-03-15)
  - Added method='svr' - Support Vector Regression (experimental)
  - Added assumption checks for t-test analysis
  - Fixed missing 'rawWeights.img' in SCCAN output
  - Fixed missing 'sccan.ccasummary' in save.lesymap printout
  - Switched default method from "BM" to "sccan"
  - Main arguments are now case insensitive ('FDR' same as 'fdr')
  - Enabled correctLesSize='both' (voxel + behavior)
  - New 'printInfo' function to route information display
  - Documentation corrections

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LESYMAP v0.0.0.9202 (Release date: 2019-01-29)
  Attempting to fix error in save.lesymap() from Issue #12

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LESYMAP v0.0.0.9201 (Release date: 2018-09-14)

  This is a major update, the default SCCAN output has changed:
  - SCCAN weights now show relationship with behavior
  - SCCAN weights can now range -1 to 1
  - added 'directionalSCCAN' argument for back compatbility
  - default sparseness range is now -0.9 to 0.9
  - removed pval.img output from SCCAN output
  - removed rawStat argument from SCCAN
  - raw SCCAN weights always returned in rawWeights.img output
  - new outputs returned from SCCAN: eig2 and ccasummary
  - removed sccan.BehaviorWeight output, info now in eig2 output
  - added sparseness.behav argument to lsm_sccan
  - changed names for lowerSparseness, upperSparseness, nFolds, etc.
  - overall info display improvements
  - increased 'cvRepetitions' automatically for small samples
  - lesymap screen output now captured in printedOutput variable
  - save.lesymap() now saving printed output
  - changed warnings to cat for proper output capture

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LESYMAP v0.0.0.9009 (Release date: 2018-09-03)

  Enabled maxBased SCCAN approach (experimental)
  Added new output to SCCAN results: sccan.BehaviorWeight
  Removed 'caret' requirement in optimize_SCCANsparseness

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LESYMAP v0.0.0.9008 (Release date: 2018-08-09)

  Fixed getLesionSize bug, now accepting filenames
  Removed direct 4D image operations, now converting to list
  More checks for filenames with 255 valued lesions

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LESYMAP v0.0.0.9007 (Release date: 2017-11-05)

  Enabled voxel-wise permutations in BMfast
  Removed nparcomp package dependency

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LESYMAP v0.0.0.9006 (Release date: 2017-10-29)

  Fixed zmap.val bug for Brunner-Munzel tests
  Putting 1 instead of 0 for pval.img background

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LESYMAP v0.0.0.9005 (Release date: 2017-10-23)

  Added automatic new version check.

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LESYMAP v0.0.0.9004 (Release date: 2017-10-23)

  New tool to bring lesions in template space: registerLesionToTemplate
  Added new template: MNI152_ICBM2009c
  Bug fix: no threshold when multipleComparison='none'

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LESYMAP v0.0.0.9003 (Release date: 2017-06-07)

  Fixed correct zscore sign computation.
  Verified zscores of BM and ttest match MRIcron results (N=131).
  Documentation and example enhancements.

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LESYMAP v0.0.0.9002 (Release date: 2017-06-05) John Muschelli

  Prepended naked calls with package name.
  Fixed travis requirements.

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LESYMAP v0.0.0.9001 (Release date: 2017-05-31)

  First commit.