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SingleR error #158

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Jessa135 opened this issue Feb 20, 2024 · 1 comment
Open

SingleR error #158

Jessa135 opened this issue Feb 20, 2024 · 1 comment

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@Jessa135
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Jessa135 commented Feb 20, 2024

Please post issues in https://github.com/LTLA/SingleR

hi,
I'm using R package SingleR to annotate cell types, but I met an error:

> refdata <- MonacoImmuneData()
1708402709200

Error in collect():
! Failed to collect lazy table.
Caused by error in db_collect():
! Arguments in ... must be used.
✖ Problematic argument:
• ..1 = Inf
ℹ Did you misspell an argument name?

I run rlang::last_trace()
1708402856524

I re-installed the packages "SingleR" and "dbplyr“, but it didn't work.
my R version is "R version 4.2.2 (2022-10-31)"

I could not find the cause of this error. Thank you for being helpful.

@dgoekbuget
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dgoekbuget commented Mar 2, 2024

Downgrading dbplyr is a workaround for me: devtools::install_version("dbplyr", version = "2.3.3")

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