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In 711 handle multiple configs - part 1 #124

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wants to merge 29 commits into from
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In 711 handle multiple configs - part 1 #124

wants to merge 29 commits into from

Commits on Jul 4, 2024

  1. add utils.subset_samplesheet_samples

    @jethror1
    jethror1 committed Jul 4, 2024
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  2. add tests for utils.subset_samplesheet_samples

    @jethror1
    jethror1 committed Jul 4, 2024
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  3. bump app version

    @jethror1
    jethror1 committed Jul 4, 2024
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  4. update readme with subset_samplesheet details

    @jethror1
    jethror1 committed Jul 4, 2024
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  5. fix config file reference

    @jethror1
    jethror1 committed Jul 4, 2024
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  6. add trailing new line character to printf

    @jethror1
    jethror1 committed Jul 4, 2024
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  7. update readme

    @jethror1
    jethror1 committed Jul 4, 2024
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  8. update project URL in final Slack notification

    @jethror1
    jethror1 committed Jul 4, 2024
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  9. Merge pull request #118 from eastgenomics/IN-693_v1.5.0_subset_sample… 

    …sheet

IN-693 v1.5.0 subset samplesheet (#118)
    @Yu-jinKim
    Yu-jinKim committed Jul 4, 2024
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  10. fix #109 - improve suppress notifications

    @jethror1
    jethror1 committed Jul 4, 2024
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  11. improve suppress automation alert message

    @jethror1
    jethror1 committed Jul 4, 2024
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Commits on Jul 5, 2024

  1. Merge pull request #119 from eastgenomics/IN-693_v1.5.0_update_suppre… 

    …ss_alert

IN-693 v1.5.0 update suppress alert (#119)
    @Yu-jinKim
    Yu-jinKim committed Jul 5, 2024
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Commits on Jul 9, 2024

  1. add additional line break

    @jethror1
    jethror1 committed Jul 9, 2024
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Commits on Jul 10, 2024

  1. Merge pull request #120 from eastgenomics/IN-693_v1.5.0_update_suppre… 

    …ss_alert

IN-693 v1.5.0 - update error message (#120)
    @Yu-jinKim
    Yu-jinKim committed Jul 10, 2024
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Commits on Jul 18, 2024

  1. Merge pull request #121 from eastgenomics/v1.5.0-release 

    v1.5.0 release -> main (#121)

Co-Authored-By: Yu-jinKim <yujin.kim@hotmail.fr>
    @Yu-jinKim
    Yu-jinKim committed Jul 18, 2024
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  2. bump version

    @Yu-jinKim
    Yu-jinKim committed Jul 18, 2024
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  3. remove assertion for mixed assays + remove mismatching attempt

    @Yu-jinKim
    Yu-jinKim committed Jul 18, 2024
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Commits on Jul 31, 2024

  1. move static methods to dedicated script

    @Yu-jinKim
    Yu-jinKim committed Jul 31, 2024
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  2. move methods to dedicated scripts + start new class for building DX t… 

    …hings
    @Yu-jinKim
    Yu-jinKim committed Jul 31, 2024
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  3. move get_or_create_dx_project + return assays method

    @Yu-jinKim
    Yu-jinKim committed Jul 31, 2024
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Commits on Aug 1, 2024

  1. change structure of config2samples for more flexibility

    @Yu-jinKim
    Yu-jinKim committed Aug 1, 2024
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  2. create analysis project logs method for DXBuilder

    @Yu-jinKim
    Yu-jinKim committed Aug 1, 2024
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  3. get upload tars method moved to dxbuilder

    @Yu-jinKim
    Yu-jinKim committed Aug 1, 2024
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  4. set the parent output directory for each project

    @Yu-jinKim
    Yu-jinKim committed Aug 1, 2024
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Commits on Aug 2, 2024

  1. adjust indent

    @Yu-jinKim
    Yu-jinKim committed Aug 2, 2024
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  2. parameters to be passed to jira object

    @Yu-jinKim
    Yu-jinKim committed Aug 2, 2024
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  3. remove samplesheet subset + remove whitespaces

    @Yu-jinKim
    Yu-jinKim committed Aug 2, 2024
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  4. adapt code to use dx_builder

    @Yu-jinKim
    Yu-jinKim committed Aug 2, 2024
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  5. simplify and use jira object as object

    @Yu-jinKim
    Yu-jinKim committed Aug 2, 2024
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