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Merge pull request #8733 from lexming/20190811025715_new_pr_VEP960
{bio}[foss/2019a] VEP v96.0
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easybuild/easyconfigs/v/VEP/VEP-96.0-foss-2019a-Perl-5.28.1.eb
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name = 'VEP' | ||
version = '96.0' | ||
versionsuffix = '-Perl-%(perlver)s' | ||
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homepage = 'https://www.ensembl.org/info/docs/tools/vep' | ||
description = """Variant Effect Predictor (VEP) determines the effect of your | ||
variants (SNPs, insertions, deletions, CNVs or structural variants) on genes, | ||
transcripts, and protein sequence, as well as regulatory regions. | ||
Includes EnsEMBL-XS, which provides pre-compiled replacements for frequently | ||
used routines in VEP.""" | ||
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toolchain = {'name': 'foss', 'version': '2019a'} | ||
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source_urls = ['https://github.com/Ensembl/ensembl-vep/archive/release/'] | ||
sources = ['%(version)s.tar.gz'] | ||
checksums = ['338f4774683da45e53bdf9a2cfffad4803df53fc4d3ee72817a9e79e63e513f7'] | ||
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dependencies = [ | ||
('Perl', '5.28.1'), | ||
('DBD-mysql', '4.050', versionsuffix), | ||
('BioPerl', '1.7.2', versionsuffix), | ||
('Bio-DB-HTS', '3.01', versionsuffix), | ||
] | ||
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exts_defaultclass = 'PerlModule' | ||
exts_filter = ("perldoc -lm %(ext_name)s ", "") | ||
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exts_list = [ | ||
('Bio::EnsEMBL::XS', '2.3.2', { | ||
'source_tmpl': '%(version)s.tar.gz', | ||
'source_urls': ['https://github.com/Ensembl/ensembl-xs/archive'], | ||
'checksums': ['aafc59568cd1042259196575e99cdfeef9c0fb7966e5f915cfaf38c70885ffa5'], | ||
}), | ||
] | ||
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moduleclass = 'bio' |