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Erro: unmapped2anchors.py: error: no such option: -Q #3
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are you using the Docker container or did you install CirComPara2 in your environment? |
I install CirComPara2 in a conda environment by the following steps: conda create -n circompara2_py2_env -c conda-forge python=2.7
conda install -n circompara2_py2_env -c bioconda samtools bedtools hisat2 star
conda install -n circompara2_py2_env -c bioconda segemehl
source activate circompara2_py2_env
git clone http://github.com/egaffo/circompara2
cd circompara2/
./src/utils/bash/install_circompara |
Unfortunately, I was not able to reproduce your error. |
You are calling an older version of find_circ (v1), possibly from some instance in your environment. |
Thanks. I upgraded the unmapped2anchors.py from the github master branch and solved it. |
When I run the command
circompara2
it reported an error:The text was updated successfully, but these errors were encountered: