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Eugene Katrukha edited this page Apr 11, 2023
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Welcome to the BigTrace wiki!
This is open-source FIJI plugin for tracing and analysis of curvilinear structures in volumetric microscopy datasets (using BigVolumeViewer for visualization).
At the current moment, it implements 3D ROIs (points and lines) for manual/semi-manual segmentation of lines, curves, and spotty objects.
Main pages of Wiki to start with:
Content:
- Display and navigation
- Creating ROIs
- Panels:
- Semi-auto tracing
- ROI shape interpolation
- File format
- Main shortcuts
Developed in Cell Biology group of Utrecht University.
Check out Updates history. The plugin and this wiki are under constant development.
E-mail for any questions, feedback, errors or suggestion
or tag @ekatrukha at image.sc forum.